Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
CDC42BPBQ9Y5S2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
CDC42BPBQ9Y5S2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CDC42BPBQ9Y5S2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC33.26■■■□□ 2.92
CDC42BPBQ9Y5S2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC33.26■■■□□ 2.92
CDC42BPBQ9Y5S2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC33.26■■■□□ 2.92
CDC42BPBQ9Y5S2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC33.26■■■□□ 2.91
CDC42BPBQ9Y5S2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDC42BPBQ9Y5S2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 AC055733.4-201ENST00000638462 1354 ntBASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPBQ9Y5S2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 SLC29A4P1-201ENST00000398760 971 ntBASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 AC010141.2-201ENST00000452426 721 ntBASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPBQ9Y5S2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
CDC42BPBQ9Y5S2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC33.23■■■□□ 2.91
CDC42BPBQ9Y5S2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDC42BPBQ9Y5S2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC33.23■■■□□ 2.91
CDC42BPBQ9Y5S2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
CDC42BPBQ9Y5S2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPBQ9Y5S2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPBQ9Y5S2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.21■■■□□ 2.91
CDC42BPBQ9Y5S2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
CDC42BPBQ9Y5S2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
CDC42BPBQ9Y5S2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.2■■■□□ 2.9
CDC42BPBQ9Y5S2 CYP2T1P-201ENST00000432607 1285 ntBASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 AC138907.5-202ENST00000569484 235 ntBASIC33.19■■■□□ 2.9
CDC42BPBQ9Y5S2 AF201337.1-201ENST00000520239 748 ntBASIC33.18■■■□□ 2.9
CDC42BPBQ9Y5S2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPBQ9Y5S2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 AC073210.2-201ENST00000430369 194 ntBASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 AC133552.2-202ENST00000575694 574 ntBASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 AC010536.3-201ENST00000620306 533 ntBASIC33.16■■■□□ 2.9
CDC42BPBQ9Y5S2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC33.15■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms