Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 SUDS3P1-201ENST00000505831 966 ntBASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 LINC01529-204ENST00000636474 1715 ntBASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 RARRES2P6-201ENST00000567333 442 ntBASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 AL031432.3-201ENST00000607698 485 ntBASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM4Q9Y4Z0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 AL136162.1-201ENST00000607711 1078 ntBASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 FP325331.1-202ENST00000623531 1380 ntBASIC17.28■□□□□ 0.36
LSM4Q9Y4Z0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 LINC01960-201ENST00000563759 1884 ntBASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM4Q9Y4Z0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LSM4Q9Y4Z0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM4Q9Y4Z0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 AC135279.3-201ENST00000610945 1311 ntBASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 EDA-201ENST00000338901 1233 ntBASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 SRD5A1P1-201ENST00000442297 786 ntBASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LSM4Q9Y4Z0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.24■□□□□ 0.35
LSM4Q9Y4Z0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms