Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPG7Q9UQ90 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.53■■■□□ 2.16
SPG7Q9UQ90 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
SPG7Q9UQ90 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.53■■■□□ 2.16
SPG7Q9UQ90 ANOS2P-203ENST00000472227 1816 ntBASIC28.53■■■□□ 2.16
SPG7Q9UQ90 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 GPX1P1-201ENST00000388829 606 ntBASIC28.52■■■□□ 2.16
SPG7Q9UQ90 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.52■■■□□ 2.16
SPG7Q9UQ90 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
SPG7Q9UQ90 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SPG7Q9UQ90 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.5■■■□□ 2.15
SPG7Q9UQ90 AC092068.2-201ENST00000590491 1708 ntBASIC28.49■■■□□ 2.15
SPG7Q9UQ90 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SPG7Q9UQ90 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
SPG7Q9UQ90 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.49■■■□□ 2.15
SPG7Q9UQ90 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.49■■■□□ 2.15
SPG7Q9UQ90 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
SPG7Q9UQ90 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPG7Q9UQ90 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 UBE2DNL-204ENST00000602536 740 ntBASIC28.47■■■□□ 2.15
SPG7Q9UQ90 AC231657.2-201ENST00000624556 255 ntBASIC28.47■■■□□ 2.15
SPG7Q9UQ90 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPG7Q9UQ90 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 AC079089.2-201ENST00000531211 1277 ntBASIC28.46■■■□□ 2.15
SPG7Q9UQ90 DUX4L16-201ENST00000555130 1264 ntBASIC28.46■■■□□ 2.15
SPG7Q9UQ90 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 AC055733.4-201ENST00000638462 1354 ntBASIC28.46■■■□□ 2.15
SPG7Q9UQ90 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.46■■■□□ 2.15
SPG7Q9UQ90 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 AP001160.3-201ENST00000601484 763 ntBASIC28.45■■■□□ 2.14
SPG7Q9UQ90 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
SPG7Q9UQ90 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 AL050303.2-201ENST00000619798 666 ntBASIC28.44■■■□□ 2.14
SPG7Q9UQ90 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
SPG7Q9UQ90 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms