Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 ABHD17AP4-201ENST00000411545 909 ntBASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 LINC01960-201ENST00000563759 1884 ntBASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COMMD3Q9UBI1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3Q9UBI1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COMMD3Q9UBI1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3Q9UBI1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19■□□□□ 0.63
COMMD3Q9UBI1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
COMMD3Q9UBI1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 LINC01006-201ENST00000333319 2292 ntBASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.98■□□□□ 0.63
COMMD3Q9UBI1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 SPCS2P3-201ENST00000500401 656 ntBASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COMMD3Q9UBI1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms