Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 AC139530.1-201ENST00000575312 1977 ntBASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 LINC01960-201ENST00000563759 1884 ntBASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB16Q9NRJ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 AF106564.1-201ENST00000607058 2553 ntBASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB16Q9NRJ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB16Q9NRJ7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AC009299.2-201ENST00000482477 511 ntBASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AL451085.2-201ENST00000605085 799 ntBASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 MIR4787-201ENST00000607364 84 ntBASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB16Q9NRJ7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 AC009102.2-201ENST00000606772 1639 ntBASIC18.67■□□□□ 0.58
PCDHB16Q9NRJ7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms