Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.44■□□□□ 0.86
NEUROD4Q9HD90 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 DUX4L19-201ENST00000557448 1267 ntBASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 AL138724.1-201ENST00000606771 1088 ntBASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEUROD4Q9HD90 PKD1P6-201ENST00000343738 4769 ntBASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEUROD4Q9HD90 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 AC087239.1-201ENST00000622671 572 ntBASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEUROD4Q9HD90 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 FBXW4P1-201ENST00000426721 2239 ntBASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 SYT6-210ENST00000641643 1587 ntBASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.4■□□□□ 0.86
NEUROD4Q9HD90 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NEUROD4Q9HD90 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEUROD4Q9HD90 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEUROD4Q9HD90 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms