Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 PBX2P1-201ENST00000493219 1291 ntBASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
CLK4Q9HAZ1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 EDA-201ENST00000338901 1233 ntBASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CLK4Q9HAZ1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK4Q9HAZ1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
CLK4Q9HAZ1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK4Q9HAZ1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
CLK4Q9HAZ1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 OR2I1P-207ENST00000453522 948 ntBASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 AL355001.2-201ENST00000620617 1191 ntBASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLK4Q9HAZ1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms