Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 PRORSD1P-201ENST00000295112 541 ntBASIC18.33■□□□□ 0.52
GSX1Q9H4S2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.33■□□□□ 0.52
GSX1Q9H4S2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSX1Q9H4S2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 AC005181.1-201ENST00000604782 1256 ntBASIC18.31■□□□□ 0.52
GSX1Q9H4S2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GSX1Q9H4S2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 AC133041.1-202ENST00000642053 222 ntBASIC18.3■□□□□ 0.52
GSX1Q9H4S2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSX1Q9H4S2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 AC098934.4-201ENST00000564127 592 ntBASIC18.29■□□□□ 0.52
GSX1Q9H4S2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GSX1Q9H4S2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms