Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CHMP4BQ9H444 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CHMP4BQ9H444 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CHMP4BQ9H444 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.36■■□□□ 1.97
CHMP4BQ9H444 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHMP4BQ9H444 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 SLC47A1P1-202ENST00000449666 945 ntBASIC27.35■■□□□ 1.97
CHMP4BQ9H444 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
CHMP4BQ9H444 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 BX842568.3-201ENST00000418104 571 ntBASIC27.34■■□□□ 1.97
CHMP4BQ9H444 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHMP4BQ9H444 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 AL136162.1-201ENST00000607711 1078 ntBASIC27.33■■□□□ 1.97
CHMP4BQ9H444 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.33■■□□□ 1.97
CHMP4BQ9H444 LINC00565-201ENST00000562710 2331 ntBASIC27.33■■□□□ 1.97
CHMP4BQ9H444 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CHMP4BQ9H444 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 AC135279.3-201ENST00000610945 1311 ntBASIC27.32■■□□□ 1.96
CHMP4BQ9H444 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHMP4BQ9H444 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 MIR4767-201ENST00000582827 78 ntBASIC27.31■■□□□ 1.96
CHMP4BQ9H444 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHMP4BQ9H444 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHMP4BQ9H444 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 AC024257.2-201ENST00000549699 147 ntBASIC27.29■■□□□ 1.96
CHMP4BQ9H444 AC233992.3-201ENST00000607491 485 ntBASIC27.29■■□□□ 1.96
CHMP4BQ9H444 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHMP4BQ9H444 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHMP4BQ9H444 AL034346.1-201ENST00000568244 1277 ntBASIC27.28■■□□□ 1.96
CHMP4BQ9H444 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms