Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
CDH23Q9H251 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.37■■□□□ 1.33
CDH23Q9H251 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.37■■□□□ 1.33
CDH23Q9H251 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CDH23Q9H251 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.36■■□□□ 1.33
CDH23Q9H251 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDH23Q9H251 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
CDH23Q9H251 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CDH23Q9H251 AC211429.1-201ENST00000415277 523 ntBASIC23.35■■□□□ 1.33
CDH23Q9H251 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.35■■□□□ 1.33
CDH23Q9H251 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.35■■□□□ 1.33
CDH23Q9H251 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH23Q9H251 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.35■■□□□ 1.33
CDH23Q9H251 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CDH23Q9H251 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.34■■□□□ 1.33
CDH23Q9H251 MIR4758-201ENST00000577688 71 ntBASIC23.34■■□□□ 1.33
CDH23Q9H251 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDH23Q9H251 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.34■■□□□ 1.33
CDH23Q9H251 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.34■■□□□ 1.33
CDH23Q9H251 AC006058.3-201ENST00000606217 1069 ntBASIC23.34■■□□□ 1.33
CDH23Q9H251 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.34■■□□□ 1.33
CDH23Q9H251 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CDH23Q9H251 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.34■■□□□ 1.33
CDH23Q9H251 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CDH23Q9H251 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH23Q9H251 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.34■■□□□ 1.33
CDH23Q9H251 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.33■■□□□ 1.33
CDH23Q9H251 ESRRAP1-201ENST00000400596 1257 ntBASIC23.33■■□□□ 1.33
CDH23Q9H251 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH23Q9H251 AC073912.3-201ENST00000624414 853 ntBASIC23.33■■□□□ 1.33
CDH23Q9H251 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDH23Q9H251 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.33■■□□□ 1.32
CDH23Q9H251 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CDH23Q9H251 MYCNOS-205ENST00000641950 531 ntBASIC23.33■■□□□ 1.32
CDH23Q9H251 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.32■■□□□ 1.32
CDH23Q9H251 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH23Q9H251 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH23Q9H251 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.32■■□□□ 1.32
CDH23Q9H251 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.31■■□□□ 1.32
CDH23Q9H251 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDH23Q9H251 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.31■■□□□ 1.32
CDH23Q9H251 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.31■■□□□ 1.32
CDH23Q9H251 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.31■■□□□ 1.32
CDH23Q9H251 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.31■■□□□ 1.32
CDH23Q9H251 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH23Q9H251 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.31■■□□□ 1.32
CDH23Q9H251 MIPEPP3-201ENST00000412105 444 ntBASIC23.31■■□□□ 1.32
CDH23Q9H251 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.31■■□□□ 1.32
CDH23Q9H251 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDH23Q9H251 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH23Q9H251 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.3■■□□□ 1.32
CDH23Q9H251 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.3■■□□□ 1.32
CDH23Q9H251 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.3■■□□□ 1.32
CDH23Q9H251 MIR4497-201ENST00000583208 89 ntBASIC23.3■■□□□ 1.32
CDH23Q9H251 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CDH23Q9H251 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CDH23Q9H251 CYP2T1P-201ENST00000432607 1285 ntBASIC23.29■■□□□ 1.32
CDH23Q9H251 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.29■■□□□ 1.32
CDH23Q9H251 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH23Q9H251 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.29■■□□□ 1.32
CDH23Q9H251 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.29■■□□□ 1.32
CDH23Q9H251 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.29■■□□□ 1.32
CDH23Q9H251 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH23Q9H251 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDH23Q9H251 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH23Q9H251 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH23Q9H251 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH23Q9H251 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH23Q9H251 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.28■■□□□ 1.32
CDH23Q9H251 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.28■■□□□ 1.32
CDH23Q9H251 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH23Q9H251 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH23Q9H251 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.28■■□□□ 1.32
CDH23Q9H251 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.28■■□□□ 1.32
CDH23Q9H251 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH23Q9H251 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms