Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 TNRC18P3-201ENST00000441896 2691 ntBASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 PCDHB18P-201ENST00000524813 2368 ntBASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CYSTM1Q9H1C7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CYSTM1Q9H1C7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CYSTM1Q9H1C7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.71□□□□□ -0.37
CYSTM1Q9H1C7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CYSTM1Q9H1C7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms