Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FAM49AQ9H0Q0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
FAM49AQ9H0Q0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
FAM49AQ9H0Q0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 ID1-201ENST00000376105 1233 ntBASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 AC005224.4-201ENST00000583262 1652 ntBASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
FAM49AQ9H0Q0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.93■■□□□ 1.42
FAM49AQ9H0Q0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FAM49AQ9H0Q0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FAM49AQ9H0Q0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
FAM49AQ9H0Q0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.93■■□□□ 1.42
FAM49AQ9H0Q0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 AC073111.5-205ENST00000641717 521 ntBASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FAM49AQ9H0Q0 ESRRAP2-201ENST00000418437 1549 ntBASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 BID-214ENST00000617586 542 ntTSL 5 BASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
FAM49AQ9H0Q0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 CDCA4P2-201ENST00000441182 718 ntBASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 AC009237.3-201ENST00000393279 1427 ntBASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
FAM49AQ9H0Q0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
FAM49AQ9H0Q0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
FAM49AQ9H0Q0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 AC079089.2-201ENST00000531211 1277 ntBASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FAM49AQ9H0Q0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 RAP2CP1-201ENST00000605103 478 ntBASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 AC104187.1-201ENST00000607510 612 ntBASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 DUSP8P5-201ENST00000422884 1815 ntBASIC23.87■■□□□ 1.41
FAM49AQ9H0Q0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 HLA-L-209ENST00000420110 1011 ntBASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 KRT87P-202ENST00000534226 1464 ntBASIC23.86■■□□□ 1.41
FAM49AQ9H0Q0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms