Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-1Q9BYR8 AC009102.2-201ENST00000606772 1639 ntBASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-1Q9BYR8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
KRTAP3-1Q9BYR8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 STK33P1-201ENST00000423835 1218 ntBASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 AC021242.3-201ENST00000607598 1377 ntBASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms