Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 MIR3181-201ENST00000578512 73 ntBASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF4Q9BUZ4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAF4Q9BUZ4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAF4Q9BUZ4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF4Q9BUZ4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF4Q9BUZ4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.27■□□□□ 0.67
TRAF4Q9BUZ4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRAF4Q9BUZ4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
TRAF4Q9BUZ4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TRAF4Q9BUZ4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF4Q9BUZ4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 BX842568.3-201ENST00000418104 571 ntBASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 AC233992.3-201ENST00000607491 485 ntBASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 MIR6821-201ENST00000617625 74 ntBASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF4Q9BUZ4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 IRS3P-201ENST00000223076 1006 ntBASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF4Q9BUZ4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms