Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 AC010525.1-201ENST00000585559 441 ntBASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 KRT18P57-201ENST00000443599 1254 ntBASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 AL450487.1-201ENST00000426799 995 ntBASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 AC145285.6-201ENST00000604632 637 ntBASIC9.02□□□□□ -0.96
SYNE2Q8WXH0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 HES2-206ENST00000489730 730 ntTSL 2 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 AL137013.1-201ENST00000432946 1228 ntBASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 AL355075.4-201ENST00000554988 638 ntBASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC9.02□□□□□ -0.97
SYNE2Q8WXH0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 CLEC4GP1-201ENST00000596555 870 ntBASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 AP001412.1-201ENST00000608405 714 ntBASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 AC133637.1-201ENST00000624115 1537 ntBASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC9.01□□□□□ -0.97
SYNE2Q8WXH0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC9□□□□□ -0.97
SYNE2Q8WXH0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 EEF1DP3-203ENST00000566025 782 ntBASIC9□□□□□ -0.97
SYNE2Q8WXH0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC139530.3-201ENST00000620344 690 ntBASIC9□□□□□ -0.97
SYNE2Q8WXH0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC016405.3-201ENST00000607710 860 ntBASIC9□□□□□ -0.97
SYNE2Q8WXH0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 CYP2T1P-201ENST00000432607 1285 ntBASIC9□□□□□ -0.97
SYNE2Q8WXH0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC9□□□□□ -0.97
SYNE2Q8WXH0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms