Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGP1Q8N7R0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGP1Q8N7R0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGP1Q8N7R0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 AC004687.1-201ENST00000579003 1625 ntBASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGP1Q8N7R0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGP1Q8N7R0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 DUX4L18-201ENST00000553347 1267 ntBASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGP1Q8N7R0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.27■□□□□ 0.68
NANOGP1Q8N7R0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGP1Q8N7R0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.67
NANOGP1Q8N7R0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGP1Q8N7R0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGP1Q8N7R0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms