Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL27A1Q8IZC6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL27A1Q8IZC6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
COL27A1Q8IZC6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 AC092068.2-201ENST00000590491 1708 ntBASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 AC010141.2-201ENST00000452426 721 ntBASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.69■□□□□ 0.9
COL27A1Q8IZC6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 CD99P1-205ENST00000527459 561 ntBASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 AC066615.1-201ENST00000640911 628 ntBASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL27A1Q8IZC6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 AC138907.5-202ENST00000569484 235 ntBASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 AC005181.1-201ENST00000604782 1256 ntBASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 LINC01960-201ENST00000563759 1884 ntBASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.67■□□□□ 0.9
COL27A1Q8IZC6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL27A1Q8IZC6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms