Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 LINC00565-201ENST00000562710 2331 ntBASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC116Q8IYX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CCDC116Q8IYX3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 AC079089.2-201ENST00000531211 1277 ntBASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC116Q8IYX3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 AC087239.1-201ENST00000622671 572 ntBASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC116Q8IYX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 AC010141.3-201ENST00000456659 717 ntBASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 C11orf96-202ENST00000528572 1834 ntBASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC116Q8IYX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC116Q8IYX3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC116Q8IYX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC116Q8IYX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC116Q8IYX3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 BX842568.3-201ENST00000418104 571 ntBASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 AC106739.1-201ENST00000617035 715 ntBASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 AC110285.6-201ENST00000617652 491 ntBASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC116Q8IYX3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 AP005435.1-201ENST00000529293 1178 ntBASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC116Q8IYX3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC116Q8IYX3 AC233992.3-201ENST00000607491 485 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms