Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 AC022616.5-201ENST00000518796 181 ntBASIC21.72■■□□□ 1.07
PACS2Q86VP3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.72■■□□□ 1.07
PACS2Q86VP3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.72■■□□□ 1.07
PACS2Q86VP3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.71■■□□□ 1.07
PACS2Q86VP3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS2Q86VP3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS2Q86VP3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PACS2Q86VP3 AC103834.1-201ENST00000520383 144 ntBASIC21.71■■□□□ 1.07
PACS2Q86VP3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
PACS2Q86VP3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS2Q86VP3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PACS2Q86VP3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PACS2Q86VP3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PACS2Q86VP3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS2Q86VP3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.07
PACS2Q86VP3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PACS2Q86VP3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PACS2Q86VP3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PACS2Q86VP3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PACS2Q86VP3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PACS2Q86VP3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.69■■□□□ 1.06
PACS2Q86VP3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.69■■□□□ 1.06
PACS2Q86VP3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS2Q86VP3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS2Q86VP3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.69■■□□□ 1.06
PACS2Q86VP3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.69■■□□□ 1.06
PACS2Q86VP3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS2Q86VP3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.69■■□□□ 1.06
PACS2Q86VP3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS2Q86VP3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PACS2Q86VP3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.69■■□□□ 1.06
PACS2Q86VP3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS2Q86VP3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS2Q86VP3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS2Q86VP3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.68■■□□□ 1.06
PACS2Q86VP3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PACS2Q86VP3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.68■■□□□ 1.06
PACS2Q86VP3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS2Q86VP3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS2Q86VP3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.68■■□□□ 1.06
PACS2Q86VP3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
PACS2Q86VP3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PACS2Q86VP3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.67■■□□□ 1.06
PACS2Q86VP3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS2Q86VP3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.66■■□□□ 1.06
PACS2Q86VP3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 AL592295.1-201ENST00000400984 884 ntBASIC21.66■■□□□ 1.06
PACS2Q86VP3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS2Q86VP3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PACS2Q86VP3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PACS2Q86VP3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PACS2Q86VP3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PACS2Q86VP3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PACS2Q86VP3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.65■■□□□ 1.06
PACS2Q86VP3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS2Q86VP3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PACS2Q86VP3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
PACS2Q86VP3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.64■■□□□ 1.05
PACS2Q86VP3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.64■■□□□ 1.05
PACS2Q86VP3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PACS2Q86VP3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PACS2Q86VP3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS2Q86VP3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms