Protein–RNA interactions for Protein: Q7Z2R9

SSBP3-AS1, Putative uncharacterized protein SSBP3-AS1, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-AS1Q7Z2R9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC137767.1-201ENST00000602918 1920 ntBASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC139530.1-201ENST00000575312 1977 ntBASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC080038.3-201ENST00000623346 1952 ntBASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3-AS1Q7Z2R9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC010141.3-201ENST00000456659 717 ntBASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC136469.2-201ENST00000623944 1028 ntBASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 C11orf96-202ENST00000528572 1834 ntBASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SERBP1P1-201ENST00000396021 1160 ntBASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AC131281.2-201ENST00000520478 145 ntBASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 AP005435.1-201ENST00000529293 1178 ntBASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 MIR4466-201ENST00000606121 54 ntBASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3-AS1Q7Z2R9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms