Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC1Q6VVB1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 AC024257.2-201ENST00000549699 147 ntBASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.44■□□□□ 0.7
NHLRC1Q6VVB1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 AL136162.1-201ENST00000607711 1078 ntBASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 AC068587.7-201ENST00000641602 218 ntBASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
NHLRC1Q6VVB1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 MIR4767-201ENST00000582827 78 ntBASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC1Q6VVB1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 AC110285.6-201ENST00000617652 491 ntBASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC1Q6VVB1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 AC096631.2-201ENST00000436136 790 ntBASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 AP005435.1-201ENST00000529293 1178 ntBASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 AC079089.2-201ENST00000531211 1277 ntBASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC1Q6VVB1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NHLRC1Q6VVB1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms