Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 RNF165-205ENST00000588679 2904 ntBASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN4Q6PJG9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN4Q6PJG9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
LRFN4Q6PJG9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.39■□□□□ 0.7
LRFN4Q6PJG9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.39■□□□□ 0.7
LRFN4Q6PJG9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 AC011298.3-201ENST00000615796 283 ntBASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN4Q6PJG9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 AC080038.3-201ENST00000623346 1952 ntBASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LRFN4Q6PJG9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms