Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR1Q6PIV2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
FOXR1Q6PIV2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
FOXR1Q6PIV2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.45■■□□□ 1.19
FOXR1Q6PIV2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
FOXR1Q6PIV2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 AL512631.2-201ENST00000604634 923 ntBASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 AF131216.4-201ENST00000638924 1588 ntBASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
FOXR1Q6PIV2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 PBX2P1-201ENST00000493219 1291 ntBASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR1Q6PIV2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR1Q6PIV2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR1Q6PIV2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR1Q6PIV2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXR1Q6PIV2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
FOXR1Q6PIV2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
FOXR1Q6PIV2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXR1Q6PIV2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
FOXR1Q6PIV2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
FOXR1Q6PIV2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXR1Q6PIV2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXR1Q6PIV2 AC010542.4-201ENST00000563151 1910 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms