Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 UNC93B3-201ENST00000308076 687 ntBASIC18.97■□□□□ 0.63
HIST1H3AP68431 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H3AP68431 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
HIST1H3AP68431 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HIST1H3AP68431 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H3AP68431 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 OXCT2P1-201ENST00000447263 1535 ntBASIC18.95■□□□□ 0.62
HIST1H3AP68431 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST1H3AP68431 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H3AP68431 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H3AP68431 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HIST1H3AP68431 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.93■□□□□ 0.62
HIST1H3AP68431 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H3AP68431 AC008406.3-201ENST00000620001 1374 ntBASIC18.93■□□□□ 0.62
HIST1H3AP68431 OR7E47P-201ENST00000546390 1422 ntBASIC18.92■□□□□ 0.62
HIST1H3AP68431 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 BX842568.3-201ENST00000418104 571 ntBASIC18.92■□□□□ 0.62
HIST1H3AP68431 AC024257.2-201ENST00000549699 147 ntBASIC18.92■□□□□ 0.62
HIST1H3AP68431 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 MIR4767-201ENST00000582827 78 ntBASIC18.92■□□□□ 0.62
HIST1H3AP68431 AL136162.1-201ENST00000607711 1078 ntBASIC18.92■□□□□ 0.62
HIST1H3AP68431 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HIST1H3AP68431 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H3AP68431 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.92■□□□□ 0.62
HIST1H3AP68431 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H3AP68431 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H3AP68431 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H3AP68431 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.91■□□□□ 0.62
HIST1H3AP68431 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms