Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.57■□□□□ 0.88
WNT3P56703 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
WNT3P56703 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
WNT3P56703 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3P56703 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.56■□□□□ 0.88
WNT3P56703 AC026310.3-201ENST00000625186 2373 ntBASIC20.56■□□□□ 0.88
WNT3P56703 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3P56703 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.56■□□□□ 0.88
WNT3P56703 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.56■□□□□ 0.88
WNT3P56703 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.56■□□□□ 0.88
WNT3P56703 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.56■□□□□ 0.88
WNT3P56703 AC099791.2-201ENST00000605725 427 ntBASIC20.56■□□□□ 0.88
WNT3P56703 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
WNT3P56703 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
WNT3P56703 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3P56703 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
WNT3P56703 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
WNT3P56703 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
WNT3P56703 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.55■□□□□ 0.88
WNT3P56703 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
WNT3P56703 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3P56703 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
WNT3P56703 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3P56703 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3P56703 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
WNT3P56703 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.55■□□□□ 0.88
WNT3P56703 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3P56703 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3P56703 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.54■□□□□ 0.88
WNT3P56703 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
WNT3P56703 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3P56703 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.54■□□□□ 0.88
WNT3P56703 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.54■□□□□ 0.88
WNT3P56703 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.54■□□□□ 0.88
WNT3P56703 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3P56703 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3P56703 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3P56703 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
WNT3P56703 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.53■□□□□ 0.88
WNT3P56703 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
WNT3P56703 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.53■□□□□ 0.88
WNT3P56703 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3P56703 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
WNT3P56703 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.52■□□□□ 0.88
WNT3P56703 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.52■□□□□ 0.88
WNT3P56703 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.52■□□□□ 0.88
WNT3P56703 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3P56703 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.52■□□□□ 0.88
WNT3P56703 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
WNT3P56703 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
WNT3P56703 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.51■□□□□ 0.87
WNT3P56703 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.51■□□□□ 0.87
WNT3P56703 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
WNT3P56703 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
WNT3P56703 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.51■□□□□ 0.87
WNT3P56703 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
WNT3P56703 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
WNT3P56703 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3P56703 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.5■□□□□ 0.87
WNT3P56703 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.5■□□□□ 0.87
WNT3P56703 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
WNT3P56703 AC079089.2-201ENST00000531211 1277 ntBASIC20.5■□□□□ 0.87
WNT3P56703 MIR3181-201ENST00000578512 73 ntBASIC20.5■□□□□ 0.87
WNT3P56703 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.5■□□□□ 0.87
WNT3P56703 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
WNT3P56703 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.5■□□□□ 0.87
WNT3P56703 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.5■□□□□ 0.87
WNT3P56703 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
WNT3P56703 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms