Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 FAM99A-202ENST00000538190 1989 ntBASIC19.41■□□□□ 0.7
SDHAP31040 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 OR2I1P-207ENST00000453522 948 ntBASIC19.41■□□□□ 0.7
SDHAP31040 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.41■□□□□ 0.7
SDHAP31040 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.41■□□□□ 0.7
SDHAP31040 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
SDHAP31040 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SDHAP31040 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
SDHAP31040 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SDHAP31040 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAP31040 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SDHAP31040 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SDHAP31040 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAP31040 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SDHAP31040 AC079089.2-201ENST00000531211 1277 ntBASIC19.4■□□□□ 0.7
SDHAP31040 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAP31040 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAP31040 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAP31040 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAP31040 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SDHAP31040 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SDHAP31040 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.39■□□□□ 0.69
SDHAP31040 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.39■□□□□ 0.69
SDHAP31040 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.39■□□□□ 0.69
SDHAP31040 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.39■□□□□ 0.69
SDHAP31040 AL356441.2-201ENST00000443009 864 ntBASIC19.39■□□□□ 0.69
SDHAP31040 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SDHAP31040 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.39■□□□□ 0.69
SDHAP31040 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SDHAP31040 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAP31040 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SDHAP31040 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SDHAP31040 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.38■□□□□ 0.69
SDHAP31040 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.38■□□□□ 0.69
SDHAP31040 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAP31040 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.38■□□□□ 0.69
SDHAP31040 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
SDHAP31040 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.37■□□□□ 0.69
SDHAP31040 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.37■□□□□ 0.69
SDHAP31040 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SDHAP31040 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.37■□□□□ 0.69
SDHAP31040 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHAP31040 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.37■□□□□ 0.69
SDHAP31040 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHAP31040 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHAP31040 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.37■□□□□ 0.69
SDHAP31040 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.37■□□□□ 0.69
SDHAP31040 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
SDHAP31040 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.36■□□□□ 0.69
SDHAP31040 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SDHAP31040 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms