Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.22■□□□□ 0.51
CD74P04233 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.22■□□□□ 0.51
CD74P04233 RNF165-205ENST00000588679 2904 ntBASIC18.22■□□□□ 0.51
CD74P04233 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.22■□□□□ 0.51
CD74P04233 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CD74P04233 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.22■□□□□ 0.51
CD74P04233 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD74P04233 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CD74P04233 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CD74P04233 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.21■□□□□ 0.51
CD74P04233 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.21■□□□□ 0.51
CD74P04233 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.21■□□□□ 0.51
CD74P04233 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.21■□□□□ 0.51
CD74P04233 AC139795.1-202ENST00000500444 432 ntBASIC18.21■□□□□ 0.51
CD74P04233 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.21■□□□□ 0.51
CD74P04233 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CD74P04233 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CD74P04233 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.21■□□□□ 0.51
CD74P04233 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD74P04233 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CD74P04233 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CD74P04233 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.2■□□□□ 0.5
CD74P04233 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CD74P04233 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CD74P04233 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CD74P04233 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.2■□□□□ 0.5
CD74P04233 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD74P04233 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.19■□□□□ 0.5
CD74P04233 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CD74P04233 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD74P04233 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD74P04233 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD74P04233 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.19■□□□□ 0.5
CD74P04233 U85056.1-201ENST00000616429 682 ntBASIC18.19■□□□□ 0.5
CD74P04233 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD74P04233 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.18■□□□□ 0.5
CD74P04233 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CD74P04233 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.18■□□□□ 0.5
CD74P04233 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.18■□□□□ 0.5
CD74P04233 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 AC004687.1-201ENST00000579003 1625 ntBASIC18.18■□□□□ 0.5
CD74P04233 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.18■□□□□ 0.5
CD74P04233 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.18■□□□□ 0.5
CD74P04233 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD74P04233 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CD74P04233 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.17■□□□□ 0.5
CD74P04233 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.17■□□□□ 0.5
CD74P04233 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.17■□□□□ 0.5
CD74P04233 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.17■□□□□ 0.5
CD74P04233 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.17■□□□□ 0.5
CD74P04233 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms