Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.59■□□□□ 0.73
CLPXO76031 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLPXO76031 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.59■□□□□ 0.73
CLPXO76031 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
CLPXO76031 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CLPXO76031 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLPXO76031 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.59■□□□□ 0.73
CLPXO76031 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLPXO76031 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLPXO76031 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLPXO76031 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLPXO76031 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.58■□□□□ 0.72
CLPXO76031 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPXO76031 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.58■□□□□ 0.72
CLPXO76031 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPXO76031 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPXO76031 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPXO76031 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.58■□□□□ 0.72
CLPXO76031 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.58■□□□□ 0.72
CLPXO76031 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPXO76031 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.57■□□□□ 0.72
CLPXO76031 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLPXO76031 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPXO76031 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.57■□□□□ 0.72
CLPXO76031 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPXO76031 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPXO76031 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLPXO76031 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.57■□□□□ 0.72
CLPXO76031 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPXO76031 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLPXO76031 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPXO76031 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLPXO76031 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.56■□□□□ 0.72
CLPXO76031 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLPXO76031 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
CLPXO76031 DUX4L18-201ENST00000553347 1267 ntBASIC19.56■□□□□ 0.72
CLPXO76031 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.56■□□□□ 0.72
CLPXO76031 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.56■□□□□ 0.72
CLPXO76031 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CLPXO76031 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLPXO76031 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLPXO76031 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPXO76031 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLPXO76031 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPXO76031 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.55■□□□□ 0.72
CLPXO76031 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
CLPXO76031 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPXO76031 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLPXO76031 FEM1AP4-201ENST00000443167 1987 ntBASIC19.55■□□□□ 0.72
CLPXO76031 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLPXO76031 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPXO76031 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLPXO76031 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPXO76031 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
CLPXO76031 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLPXO76031 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CLPXO76031 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPXO76031 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.54■□□□□ 0.72
CLPXO76031 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLPXO76031 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPXO76031 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.54■□□□□ 0.72
CLPXO76031 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLPXO76031 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPXO76031 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLPXO76031 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLPXO76031 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPXO76031 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.53■□□□□ 0.72
CLPXO76031 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 RPS2P7-201ENST00000447334 885 ntBASIC19.53■□□□□ 0.72
CLPXO76031 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPXO76031 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLPXO76031 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms