Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 AC004687.1-201ENST00000579003 1625 ntBASIC20.13■□□□□ 0.81
TRIM3O75382 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRIM3O75382 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM3O75382 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM3O75382 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM3O75382 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM3O75382 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM3O75382 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM3O75382 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM3O75382 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 MIR935-201ENST00000401179 91 ntBASIC20.12■□□□□ 0.81
TRIM3O75382 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM3O75382 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM3O75382 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM3O75382 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM3O75382 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM3O75382 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM3O75382 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM3O75382 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM3O75382 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM3O75382 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM3O75382 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIM3O75382 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM3O75382 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
TRIM3O75382 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM3O75382 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TRIM3O75382 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM3O75382 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TRIM3O75382 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRIM3O75382 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM3O75382 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM3O75382 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.1■□□□□ 0.81
TRIM3O75382 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM3O75382 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM3O75382 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM3O75382 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM3O75382 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM3O75382 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM3O75382 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TRIM3O75382 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM3O75382 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
TRIM3O75382 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM3O75382 IGHV3-19-201ENST00000521488 291 ntBASIC20.09■□□□□ 0.81
TRIM3O75382 AP005435.1-201ENST00000529293 1178 ntBASIC20.09■□□□□ 0.81
TRIM3O75382 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM3O75382 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM3O75382 SLC25A24-204ENST00000569674 2357 ntBASIC20.09■□□□□ 0.81
TRIM3O75382 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM3O75382 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM3O75382 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM3O75382 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM3O75382 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRIM3O75382 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM3O75382 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM3O75382 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM3O75382 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM3O75382 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM3O75382 LINC00526-201ENST00000581067 1875 ntBASIC20.08■□□□□ 0.81
TRIM3O75382 IRS3P-201ENST00000223076 1006 ntBASIC20.08■□□□□ 0.81
TRIM3O75382 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM3O75382 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM3O75382 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM3O75382 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM3O75382 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM3O75382 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM3O75382 PKD1P6-201ENST00000343738 4769 ntBASIC20.08■□□□□ 0.8
TRIM3O75382 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TRIM3O75382 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM3O75382 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 TSPY26P-201ENST00000476365 1326 ntBASIC20.07■□□□□ 0.8
TRIM3O75382 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRIM3O75382 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM3O75382 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms