Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCN1O60741 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCN1O60741 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCN1O60741 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HCN1O60741 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HCN1O60741 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.18■□□□□ 0.82
HCN1O60741 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCN1O60741 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.18■□□□□ 0.82
HCN1O60741 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCN1O60741 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HCN1O60741 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HCN1O60741 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HCN1O60741 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HCN1O60741 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.17■□□□□ 0.82
HCN1O60741 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HCN1O60741 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 RARRES2P6-201ENST00000567333 442 ntBASIC20.17■□□□□ 0.82
HCN1O60741 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.17■□□□□ 0.82
HCN1O60741 AL499627.2-201ENST00000606283 725 ntBASIC20.17■□□□□ 0.82
HCN1O60741 AC242852.2-201ENST00000615738 1807 ntBASIC20.17■□□□□ 0.82
HCN1O60741 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.17■□□□□ 0.82
HCN1O60741 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCN1O60741 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 AC144652.1-201ENST00000609974 1624 ntBASIC20.16■□□□□ 0.82
HCN1O60741 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.16■□□□□ 0.82
HCN1O60741 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.16■□□□□ 0.82
HCN1O60741 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.16■□□□□ 0.82
HCN1O60741 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.16■□□□□ 0.82
HCN1O60741 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.16■□□□□ 0.82
HCN1O60741 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCN1O60741 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HCN1O60741 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
HCN1O60741 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HCN1O60741 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCN1O60741 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HCN1O60741 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
HCN1O60741 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HCN1O60741 AC133637.1-201ENST00000624115 1537 ntBASIC20.15■□□□□ 0.82
HCN1O60741 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCN1O60741 LINC01529-204ENST00000636474 1715 ntBASIC20.15■□□□□ 0.82
HCN1O60741 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCN1O60741 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCN1O60741 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
HCN1O60741 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.15■□□□□ 0.82
HCN1O60741 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.15■□□□□ 0.82
HCN1O60741 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCN1O60741 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HCN1O60741 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HCN1O60741 IRS3P-201ENST00000223076 1006 ntBASIC20.14■□□□□ 0.81
HCN1O60741 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.14■□□□□ 0.81
HCN1O60741 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCN1O60741 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HCN1O60741 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HCN1O60741 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.13■□□□□ 0.81
HCN1O60741 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HCN1O60741 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HCN1O60741 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.13■□□□□ 0.81
HCN1O60741 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.12■□□□□ 0.81
HCN1O60741 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HCN1O60741 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 AC126544.1-201ENST00000580842 1059 ntBASIC20.12■□□□□ 0.81
HCN1O60741 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.12■□□□□ 0.81
HCN1O60741 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.12■□□□□ 0.81
HCN1O60741 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.12■□□□□ 0.81
HCN1O60741 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms