Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.09■□□□□ 0.97
HDAC3O15379 AC012354.3-201ENST00000623734 483 ntBASIC21.09■□□□□ 0.97
HDAC3O15379 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC3O15379 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.09■□□□□ 0.97
HDAC3O15379 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDAC3O15379 SLC25A24-204ENST00000569674 2357 ntBASIC21.09■□□□□ 0.97
HDAC3O15379 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HDAC3O15379 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HDAC3O15379 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.08■□□□□ 0.97
HDAC3O15379 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HDAC3O15379 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HDAC3O15379 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
HDAC3O15379 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HDAC3O15379 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HDAC3O15379 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.08■□□□□ 0.96
HDAC3O15379 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HDAC3O15379 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.08■□□□□ 0.96
HDAC3O15379 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HDAC3O15379 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HDAC3O15379 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HDAC3O15379 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.07■□□□□ 0.96
HDAC3O15379 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HDAC3O15379 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HDAC3O15379 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.07■□□□□ 0.96
HDAC3O15379 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC3O15379 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC3O15379 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HDAC3O15379 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HDAC3O15379 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 BX664725.1-201ENST00000438252 379 ntBASIC21.06■□□□□ 0.96
HDAC3O15379 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC3O15379 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC3O15379 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HDAC3O15379 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HDAC3O15379 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC3O15379 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC3O15379 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HDAC3O15379 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC3O15379 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC3O15379 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
HDAC3O15379 FEM1AP4-201ENST00000443167 1987 ntBASIC21.05■□□□□ 0.96
HDAC3O15379 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC3O15379 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HDAC3O15379 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC3O15379 AL033527.3-201ENST00000566366 1196 ntBASIC21.05■□□□□ 0.96
HDAC3O15379 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC3O15379 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HDAC3O15379 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC3O15379 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC3O15379 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HDAC3O15379 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC3O15379 C17orf82-201ENST00000623772 1530 ntBASIC21.04■□□□□ 0.96
HDAC3O15379 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC3O15379 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
HDAC3O15379 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC3O15379 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC3O15379 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC3O15379 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC3O15379 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC3O15379 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC3O15379 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC3O15379 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC3O15379 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC3O15379 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC3O15379 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC3O15379 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC3O15379 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
HDAC3O15379 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC3O15379 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC3O15379 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC3O15379 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC3O15379 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC3O15379 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC3O15379 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms