Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.41■□□□□ 0.54
SHOXO15266 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SHOXO15266 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHOXO15266 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.4■□□□□ 0.54
SHOXO15266 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHOXO15266 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.4■□□□□ 0.54
SHOXO15266 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.4■□□□□ 0.54
SHOXO15266 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.4■□□□□ 0.54
SHOXO15266 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHOXO15266 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHOXO15266 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
SHOXO15266 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SHOXO15266 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHOXO15266 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.39■□□□□ 0.53
SHOXO15266 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.39■□□□□ 0.53
SHOXO15266 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHOXO15266 YBX1P4-201ENST00000392794 808 ntBASIC18.39■□□□□ 0.53
SHOXO15266 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 MIR4508-201ENST00000584178 70 ntBASIC18.39■□□□□ 0.53
SHOXO15266 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.39■□□□□ 0.53
SHOXO15266 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHOXO15266 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.38■□□□□ 0.53
SHOXO15266 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.38■□□□□ 0.53
SHOXO15266 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.38■□□□□ 0.53
SHOXO15266 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.38■□□□□ 0.53
SHOXO15266 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.38■□□□□ 0.53
SHOXO15266 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHOXO15266 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.38■□□□□ 0.53
SHOXO15266 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHOXO15266 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.38■□□□□ 0.53
SHOXO15266 ALDH1A3-203ENST00000557963 1670 ntBASIC18.38■□□□□ 0.53
SHOXO15266 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHOXO15266 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHOXO15266 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.37■□□□□ 0.53
SHOXO15266 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SHOXO15266 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SHOXO15266 KRT8P33-201ENST00000508125 1423 ntBASIC18.37■□□□□ 0.53
SHOXO15266 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.37■□□□□ 0.53
SHOXO15266 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHOXO15266 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHOXO15266 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHOXO15266 AC005229.4-201ENST00000610085 2198 ntBASIC18.37■□□□□ 0.53
SHOXO15266 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHOXO15266 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHOXO15266 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SHOXO15266 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SHOXO15266 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms