Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASQ2O14958 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASQ2O14958 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CASQ2O14958 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CASQ2O14958 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASQ2O14958 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASQ2O14958 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CASQ2O14958 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASQ2O14958 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 AF106564.1-201ENST00000607058 2553 ntBASIC20.57■□□□□ 0.88
CASQ2O14958 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
CASQ2O14958 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.57■□□□□ 0.88
CASQ2O14958 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.57■□□□□ 0.88
CASQ2O14958 ECEL1P2-201ENST00000461596 1295 ntBASIC20.57■□□□□ 0.88
CASQ2O14958 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 CR559946.2-201ENST00000623684 991 ntBASIC20.57■□□□□ 0.88
CASQ2O14958 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CASQ2O14958 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASQ2O14958 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
CASQ2O14958 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.56■□□□□ 0.88
CASQ2O14958 AL592295.1-201ENST00000400984 884 ntBASIC20.56■□□□□ 0.88
CASQ2O14958 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CASQ2O14958 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASQ2O14958 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CASQ2O14958 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.55■□□□□ 0.88
CASQ2O14958 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CASQ2O14958 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
CASQ2O14958 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASQ2O14958 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CASQ2O14958 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.54■□□□□ 0.88
CASQ2O14958 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CASQ2O14958 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASQ2O14958 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CASQ2O14958 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.54■□□□□ 0.88
CASQ2O14958 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
CASQ2O14958 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASQ2O14958 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.53■□□□□ 0.88
CASQ2O14958 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CASQ2O14958 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CASQ2O14958 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CASQ2O14958 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASQ2O14958 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.53■□□□□ 0.88
CASQ2O14958 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 LINC01006-201ENST00000333319 2292 ntBASIC20.52■□□□□ 0.88
CASQ2O14958 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CASQ2O14958 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CASQ2O14958 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CASQ2O14958 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CASQ2O14958 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASQ2O14958 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CASQ2O14958 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CASQ2O14958 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CASQ2O14958 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms