Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SOX1O00570 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.47■■□□□ 1.35
SOX1O00570 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SOX1O00570 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.47■■□□□ 1.35
SOX1O00570 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.47■■□□□ 1.35
SOX1O00570 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SOX1O00570 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SOX1O00570 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SOX1O00570 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SOX1O00570 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SOX1O00570 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
SOX1O00570 BX088651.1-201ENST00000540551 451 ntBASIC23.46■■□□□ 1.35
SOX1O00570 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.46■■□□□ 1.35
SOX1O00570 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.46■■□□□ 1.35
SOX1O00570 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
SOX1O00570 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
SOX1O00570 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
SOX1O00570 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SOX1O00570 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SOX1O00570 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
SOX1O00570 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SOX1O00570 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.45■■□□□ 1.34
SOX1O00570 AL512625.2-201ENST00000417533 625 ntBASIC23.45■■□□□ 1.34
SOX1O00570 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.45■■□□□ 1.34
SOX1O00570 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.45■■□□□ 1.34
SOX1O00570 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.45■■□□□ 1.34
SOX1O00570 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.45■■□□□ 1.34
SOX1O00570 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
SOX1O00570 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SOX1O00570 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SOX1O00570 LINC01529-204ENST00000636474 1715 ntBASIC23.45■■□□□ 1.34
SOX1O00570 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SOX1O00570 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.44■■□□□ 1.34
SOX1O00570 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SOX1O00570 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SOX1O00570 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.44■■□□□ 1.34
SOX1O00570 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SOX1O00570 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SOX1O00570 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.44■■□□□ 1.34
SOX1O00570 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.44■■□□□ 1.34
SOX1O00570 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.44■■□□□ 1.34
SOX1O00570 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.44■■□□□ 1.34
SOX1O00570 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.44■■□□□ 1.34
SOX1O00570 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.44■■□□□ 1.34
SOX1O00570 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SOX1O00570 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SOX1O00570 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SOX1O00570 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SOX1O00570 RCN1P1-201ENST00000400413 996 ntBASIC23.43■■□□□ 1.34
SOX1O00570 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.43■■□□□ 1.34
SOX1O00570 AC010141.3-201ENST00000456659 717 ntBASIC23.43■■□□□ 1.34
SOX1O00570 TERF1P5-201ENST00000477545 1207 ntBASIC23.43■■□□□ 1.34
SOX1O00570 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SOX1O00570 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.43■■□□□ 1.34
SOX1O00570 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.43■■□□□ 1.34
SOX1O00570 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SOX1O00570 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOX1O00570 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.42■■□□□ 1.34
SOX1O00570 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOX1O00570 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOX1O00570 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.42■■□□□ 1.34
SOX1O00570 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.42■■□□□ 1.34
SOX1O00570 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.42■■□□□ 1.34
SOX1O00570 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.42■■□□□ 1.34
SOX1O00570 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.42■■□□□ 1.34
SOX1O00570 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.42■■□□□ 1.34
SOX1O00570 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.42■■□□□ 1.34
SOX1O00570 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
SOX1O00570 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.42■■□□□ 1.34
SOX1O00570 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
SOX1O00570 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOX1O00570 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.41■■□□□ 1.34
SOX1O00570 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SOX1O00570 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SOX1O00570 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.41■■□□□ 1.34
SOX1O00570 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SOX1O00570 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.41■■□□□ 1.34
SOX1O00570 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.41■■□□□ 1.34
SOX1O00570 RPPH1-201ENST00000516869 333 ntBASIC23.41■■□□□ 1.34
SOX1O00570 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SOX1O00570 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.41■■□□□ 1.34
SOX1O00570 FAM197Y4-202ENST00000622692 608 ntBASIC23.41■■□□□ 1.34
SOX1O00570 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SOX1O00570 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.4■■□□□ 1.34
SOX1O00570 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
SOX1O00570 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.4■■□□□ 1.34
SOX1O00570 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.4■■□□□ 1.34
SOX1O00570 KRT18P35-201ENST00000510488 1269 ntBASIC23.4■■□□□ 1.34
SOX1O00570 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SOX1O00570 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SOX1O00570 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.4■■□□□ 1.34
SOX1O00570 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.4■■□□□ 1.34
SOX1O00570 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.4■■□□□ 1.34
SOX1O00570 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SOX1O00570 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SOX1O00570 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms