Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIRPB1O00241 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPB1O00241 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.31■□□□□ 0.52
SIRPB1O00241 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.31■□□□□ 0.52
SIRPB1O00241 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPB1O00241 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPB1O00241 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.31■□□□□ 0.52
SIRPB1O00241 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.31■□□□□ 0.52
SIRPB1O00241 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SIRPB1O00241 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPB1O00241 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPB1O00241 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPB1O00241 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPB1O00241 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPB1O00241 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.3■□□□□ 0.52
SIRPB1O00241 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.3■□□□□ 0.52
SIRPB1O00241 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPB1O00241 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPB1O00241 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPB1O00241 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.3■□□□□ 0.52
SIRPB1O00241 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPB1O00241 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SIRPB1O00241 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.29■□□□□ 0.52
SIRPB1O00241 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SIRPB1O00241 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.29■□□□□ 0.52
SIRPB1O00241 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.29■□□□□ 0.52
SIRPB1O00241 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.29■□□□□ 0.52
SIRPB1O00241 CA15P2-201ENST00000611168 834 ntBASIC18.29■□□□□ 0.52
SIRPB1O00241 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.29■□□□□ 0.52
SIRPB1O00241 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPB1O00241 SYT6-210ENST00000641643 1587 ntBASIC18.29■□□□□ 0.52
SIRPB1O00241 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIRPB1O00241 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SIRPB1O00241 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIRPB1O00241 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.28■□□□□ 0.52
SIRPB1O00241 AC131212.1-201ENST00000613771 668 ntBASIC18.28■□□□□ 0.52
SIRPB1O00241 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.28■□□□□ 0.52
SIRPB1O00241 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPB1O00241 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SIRPB1O00241 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIRPB1O00241 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SIRPB1O00241 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SIRPB1O00241 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SIRPB1O00241 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SIRPB1O00241 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 SERBP1P1-201ENST00000396021 1160 ntBASIC18.27■□□□□ 0.52
SIRPB1O00241 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.27■□□□□ 0.52
SIRPB1O00241 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIRPB1O00241 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.27■□□□□ 0.52
SIRPB1O00241 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.27■□□□□ 0.51
SIRPB1O00241 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.26■□□□□ 0.51
SIRPB1O00241 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIRPB1O00241 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
SIRPB1O00241 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.26■□□□□ 0.51
SIRPB1O00241 AL136116.3-201ENST00000402907 1138 ntBASIC18.26■□□□□ 0.51
SIRPB1O00241 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.26■□□□□ 0.51
SIRPB1O00241 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.26■□□□□ 0.51
SIRPB1O00241 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.26■□□□□ 0.51
SIRPB1O00241 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms