Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 KRT8P33-201ENST00000508125 1423 ntBASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV25-1A0A075B6N4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV25-1A0A075B6N4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 AC005229.4-201ENST00000610085 2198 ntBASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 SNX5-217ENST00000606557 1087 ntBASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV25-1A0A075B6N4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 AL353803.4-201ENST00000565882 1934 ntBASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 AC103724.3-201ENST00000564481 992 ntBASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 AL031848.2-201ENST00000607670 837 ntBASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV25-1A0A075B6N4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 AC137630.3-201ENST00000607245 391 ntBASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV25-1A0A075B6N4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms