Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 KRT8P6-201ENST00000399259 1207 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC026884.1-201ENST00000418296 457 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 HLA-DQB3-203ENST00000425319 356 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 CDCA4P3-201ENST00000442572 689 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 UBTFL5-201ENST00000443682 1191 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 RN7SL76P-201ENST00000482435 289 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 PIEZO1P1-201ENST00000485427 219 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC133548.2-202ENST00000562267 148 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 NBPF13P-201ENST00000444082 1783 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AP003108.3-201ENST00000623765 2234 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC022497.1-201ENST00000624916 3691 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC015959.1-201ENST00000623263 1377 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 GK-207ENST00000427190 4573 ntTSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AL929472.4-201ENST00000447422 691 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC106748.1-201ENST00000454801 384 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC142086.5-202ENST00000562500 217 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 MIR5193-201ENST00000584510 109 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC015936.1-201ENST00000591013 1028 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 AC011458.2-201ENST00000603937 207 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 NF1P11-201ENST00000621292 1282 ntBASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPA3F8WFD2 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms