Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH1Q9Y2L9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 Z98882.1-201ENST00000622160 2253 ntBASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH1Q9Y2L9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 AL020996.1-203ENST00000536896 2307 ntBASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH1Q9Y2L9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 NTF6A-201ENST00000591175 560 ntBASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH1Q9Y2L9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LRCH1Q9Y2L9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH1Q9Y2L9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH1Q9Y2L9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 AC007029.1-201ENST00000604183 313 ntBASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 SMPD5-203ENST00000639008 1464 ntBASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH1Q9Y2L9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms