Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 MIPEPP3-201ENST00000412105 444 ntBASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 AC092118.2-201ENST00000613495 667 ntBASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 AP001160.3-201ENST00000601484 763 ntBASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.59■■□□□ 1.85
ZC3H4Q9UPT8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 AC010536.3-201ENST00000620306 533 ntBASIC26.58■■□□□ 1.85
ZC3H4Q9UPT8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3H4Q9UPT8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 AC009237.3-201ENST00000393279 1427 ntBASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 OXCT2P1-201ENST00000447263 1535 ntBASIC26.56■■□□□ 1.84
ZC3H4Q9UPT8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 AC013268.1-206ENST00000638368 961 ntBASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 AC112229.1-201ENST00000639295 961 ntBASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ZC3H4Q9UPT8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 ESRRAP1-201ENST00000400596 1257 ntBASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 KRT18P20-201ENST00000548986 1279 ntBASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.54■■□□□ 1.84
ZC3H4Q9UPT8 MKRN4P-201ENST00000444706 1521 ntBASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.53■■□□□ 1.84
ZC3H4Q9UPT8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms