Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 Z92544.1-202ENST00000571933 1220 ntBASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 AC092028.1-203ENST00000608262 953 ntBASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB4Q9UN71 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 AC139530.1-201ENST00000575312 1977 ntBASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHGB4Q9UN71 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 C11orf96-202ENST00000528572 1834 ntBASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGB4Q9UN71 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHGB4Q9UN71 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 MTDHP2-201ENST00000601468 714 ntBASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB4Q9UN71 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB4Q9UN71 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 MIR4787-201ENST00000607364 84 ntBASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB4Q9UN71 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms