Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 AC133552.2-202ENST00000575694 574 ntBASIC21.69■■□□□ 1.06
NCDNQ9UBB6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 AC068587.7-201ENST00000641602 218 ntBASIC21.69■■□□□ 1.06
NCDNQ9UBB6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCDNQ9UBB6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 MYCNOS-205ENST00000641950 531 ntBASIC21.68■■□□□ 1.06
NCDNQ9UBB6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.68■■□□□ 1.06
NCDNQ9UBB6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCDNQ9UBB6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 HLA-L-211ENST00000482052 1765 ntBASIC21.67■■□□□ 1.06
NCDNQ9UBB6 KRT87P-202ENST00000534226 1464 ntBASIC21.67■■□□□ 1.06
NCDNQ9UBB6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 AC098590.1-201ENST00000468126 897 ntBASIC21.67■■□□□ 1.06
NCDNQ9UBB6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCDNQ9UBB6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 AL596275.1-201ENST00000423464 877 ntBASIC21.66■■□□□ 1.06
NCDNQ9UBB6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 RPS2P4-201ENST00000476944 856 ntBASIC21.66■■□□□ 1.06
NCDNQ9UBB6 SLC7A5P1-201ENST00000568957 537 ntBASIC21.66■■□□□ 1.06
NCDNQ9UBB6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCDNQ9UBB6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 AL158047.1-201ENST00000445918 881 ntBASIC21.65■■□□□ 1.06
NCDNQ9UBB6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 AC144652.1-201ENST00000609974 1624 ntBASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCDNQ9UBB6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NCDNQ9UBB6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
NCDNQ9UBB6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 GCSHP5-201ENST00000443090 522 ntBASIC21.64■■□□□ 1.05
NCDNQ9UBB6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NCDNQ9UBB6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 AC010141.3-201ENST00000456659 717 ntBASIC21.63■■□□□ 1.05
NCDNQ9UBB6 RARRES2P4-201ENST00000514074 484 ntBASIC21.63■■□□□ 1.05
NCDNQ9UBB6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NCDNQ9UBB6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCDNQ9UBB6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms