Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COPS4Q9BT78 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COPS4Q9BT78 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.87■□□□□ 0.77
COPS4Q9BT78 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.87■□□□□ 0.77
COPS4Q9BT78 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 AC103724.3-201ENST00000564481 992 ntBASIC19.87■□□□□ 0.77
COPS4Q9BT78 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COPS4Q9BT78 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS4Q9BT78 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPS4Q9BT78 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS4Q9BT78 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS4Q9BT78 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPS4Q9BT78 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 AC004448.1-201ENST00000458332 883 ntBASIC19.86■□□□□ 0.77
COPS4Q9BT78 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS4Q9BT78 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS4Q9BT78 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
COPS4Q9BT78 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COPS4Q9BT78 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 AL031848.2-201ENST00000607670 837 ntBASIC19.85■□□□□ 0.77
COPS4Q9BT78 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 AC244015.2-201ENST00000616358 1861 ntBASIC19.85■□□□□ 0.77
COPS4Q9BT78 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPS4Q9BT78 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COPS4Q9BT78 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COPS4Q9BT78 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS4Q9BT78 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPS4Q9BT78 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS4Q9BT78 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS4Q9BT78 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 AL121603.2-201ENST00000557373 2117 ntBASIC19.84■□□□□ 0.77
COPS4Q9BT78 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS4Q9BT78 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
COPS4Q9BT78 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COPS4Q9BT78 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.83■□□□□ 0.77
COPS4Q9BT78 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPS4Q9BT78 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.83■□□□□ 0.77
COPS4Q9BT78 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPS4Q9BT78 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPS4Q9BT78 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.83■□□□□ 0.76
COPS4Q9BT78 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COPS4Q9BT78 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COPS4Q9BT78 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COPS4Q9BT78 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
COPS4Q9BT78 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPS4Q9BT78 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPS4Q9BT78 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COPS4Q9BT78 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.81■□□□□ 0.76
COPS4Q9BT78 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms