Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.05■□□□□ 0.8
TM9SF2Q99805 AC136469.2-201ENST00000623944 1028 ntBASIC20.05■□□□□ 0.8
TM9SF2Q99805 AL136967.2-201ENST00000623968 743 ntBASIC20.05■□□□□ 0.8
TM9SF2Q99805 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TM9SF2Q99805 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF2Q99805 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF2Q99805 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF2Q99805 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TM9SF2Q99805 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.05■□□□□ 0.8
TM9SF2Q99805 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TM9SF2Q99805 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF2Q99805 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF2Q99805 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF2Q99805 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF2Q99805 AP001330.3-201ENST00000520123 633 ntBASIC20.04■□□□□ 0.8
TM9SF2Q99805 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TM9SF2Q99805 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF2Q99805 MIR3181-201ENST00000578512 73 ntBASIC20.04■□□□□ 0.8
TM9SF2Q99805 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF2Q99805 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF2Q99805 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF2Q99805 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF2Q99805 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF2Q99805 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.03■□□□□ 0.8
TM9SF2Q99805 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.03■□□□□ 0.8
TM9SF2Q99805 AC006455.2-201ENST00000429931 906 ntBASIC20.03■□□□□ 0.8
TM9SF2Q99805 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.03■□□□□ 0.8
TM9SF2Q99805 AC027682.1-201ENST00000562846 899 ntBASIC20.03■□□□□ 0.8
TM9SF2Q99805 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 AC242852.2-201ENST00000615738 1807 ntBASIC20.03■□□□□ 0.8
TM9SF2Q99805 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF2Q99805 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TM9SF2Q99805 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF2Q99805 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF2Q99805 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TM9SF2Q99805 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF2Q99805 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF2Q99805 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 RASA4CP-201ENST00000424092 1398 ntBASIC20.01■□□□□ 0.79
TM9SF2Q99805 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF2Q99805 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF2Q99805 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF2Q99805 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF2Q99805 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF2Q99805 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TM9SF2Q99805 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF2Q99805 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
TM9SF2Q99805 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF2Q99805 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF2Q99805 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20■□□□□ 0.79
TM9SF2Q99805 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF2Q99805 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF2Q99805 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF2Q99805 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF2Q99805 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TM9SF2Q99805 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.99■□□□□ 0.79
TM9SF2Q99805 ZNRF2P3-201ENST00000424200 374 ntBASIC19.99■□□□□ 0.79
TM9SF2Q99805 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.99■□□□□ 0.79
TM9SF2Q99805 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF2Q99805 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 pRNA.6-201ENST00000610482 90 ntBASIC19.99■□□□□ 0.79
TM9SF2Q99805 pRNA.5-201ENST00000612139 90 ntBASIC19.99■□□□□ 0.79
TM9SF2Q99805 pRNA.11-201ENST00000618423 90 ntBASIC19.99■□□□□ 0.79
TM9SF2Q99805 pRNA.13-201ENST00000619112 90 ntBASIC19.99■□□□□ 0.79
TM9SF2Q99805 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF2Q99805 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF2Q99805 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TM9SF2Q99805 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 FP325331.1-202ENST00000623531 1380 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms