Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNA5SP413-201ENST00000516373 109 ntBASIC18.58■□□□□ 0.57
SPG11Q96JI7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPG11Q96JI7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPG11Q96JI7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPG11Q96JI7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPG11Q96JI7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.58■□□□□ 0.56
SPG11Q96JI7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SPG11Q96JI7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.58■□□□□ 0.56
SPG11Q96JI7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.58■□□□□ 0.56
SPG11Q96JI7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPG11Q96JI7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SPG11Q96JI7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SPG11Q96JI7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.56■□□□□ 0.56
SPG11Q96JI7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.56■□□□□ 0.56
SPG11Q96JI7 AC133041.1-202ENST00000642053 222 ntBASIC18.56■□□□□ 0.56
SPG11Q96JI7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPG11Q96JI7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.56■□□□□ 0.56
SPG11Q96JI7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 AC105036.2-201ENST00000569468 176 ntBASIC18.55■□□□□ 0.56
SPG11Q96JI7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 GCSHP5-201ENST00000443090 522 ntBASIC18.55■□□□□ 0.56
SPG11Q96JI7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.55■□□□□ 0.56
SPG11Q96JI7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPG11Q96JI7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SPG11Q96JI7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPG11Q96JI7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SPG11Q96JI7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPG11Q96JI7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPG11Q96JI7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPG11Q96JI7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPG11Q96JI7 AC005224.4-201ENST00000583262 1652 ntBASIC18.54■□□□□ 0.56
SPG11Q96JI7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPG11Q96JI7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.53■□□□□ 0.56
SPG11Q96JI7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 KRT18P29-201ENST00000397031 1267 ntBASIC18.53■□□□□ 0.56
SPG11Q96JI7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPG11Q96JI7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SPG11Q96JI7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPG11Q96JI7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPG11Q96JI7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.52■□□□□ 0.56
SPG11Q96JI7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.52■□□□□ 0.56
SPG11Q96JI7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.52■□□□□ 0.56
SPG11Q96JI7 AP001160.3-201ENST00000601484 763 ntBASIC18.52■□□□□ 0.56
SPG11Q96JI7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPG11Q96JI7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SPG11Q96JI7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPG11Q96JI7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPG11Q96JI7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.52■□□□□ 0.55
SPG11Q96JI7 RPS2P52-201ENST00000469610 820 ntBASIC18.52■□□□□ 0.55
SPG11Q96JI7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
SPG11Q96JI7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.52■□□□□ 0.55
SPG11Q96JI7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms