Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF169Q8NCN4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF169Q8NCN4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 AP004607.4-201ENST00000530158 1459 ntBASIC23.68■■□□□ 1.38
RNF169Q8NCN4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF169Q8NCN4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.68■■□□□ 1.38
RNF169Q8NCN4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF169Q8NCN4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF169Q8NCN4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 AC080038.1-201ENST00000611274 1154 ntBASIC23.65■■□□□ 1.38
RNF169Q8NCN4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF169Q8NCN4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF169Q8NCN4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF169Q8NCN4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF169Q8NCN4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF169Q8NCN4 AC079140.4-201ENST00000507448 529 ntBASIC23.63■■□□□ 1.37
RNF169Q8NCN4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF169Q8NCN4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RNF169Q8NCN4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF169Q8NCN4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 AC006015.1-201ENST00000429970 570 ntBASIC23.62■■□□□ 1.37
RNF169Q8NCN4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF169Q8NCN4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms