Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLX4Q8IY92 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLX4Q8IY92 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SLX4Q8IY92 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLX4Q8IY92 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SLX4Q8IY92 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLX4Q8IY92 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SLX4Q8IY92 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLX4Q8IY92 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.92■■□□□ 1.9
SLX4Q8IY92 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLX4Q8IY92 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SLX4Q8IY92 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLX4Q8IY92 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLX4Q8IY92 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SLX4Q8IY92 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLX4Q8IY92 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SLX4Q8IY92 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.9■■□□□ 1.9
SLX4Q8IY92 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.9■■□□□ 1.9
SLX4Q8IY92 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SLX4Q8IY92 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.9■■□□□ 1.9
SLX4Q8IY92 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 OXCT2P1-201ENST00000447263 1535 ntBASIC26.9■■□□□ 1.9
SLX4Q8IY92 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLX4Q8IY92 AC073210.2-201ENST00000430369 194 ntBASIC26.9■■□□□ 1.9
SLX4Q8IY92 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SLX4Q8IY92 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SLX4Q8IY92 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
SLX4Q8IY92 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.89■■□□□ 1.89
SLX4Q8IY92 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLX4Q8IY92 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.88■■□□□ 1.89
SLX4Q8IY92 LINC00543-201ENST00000567234 1845 ntBASIC26.87■■□□□ 1.89
SLX4Q8IY92 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 AC009237.3-201ENST00000393279 1427 ntBASIC26.87■■□□□ 1.89
SLX4Q8IY92 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.87■■□□□ 1.89
SLX4Q8IY92 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
SLX4Q8IY92 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLX4Q8IY92 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.87■■□□□ 1.89
SLX4Q8IY92 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.87■■□□□ 1.89
SLX4Q8IY92 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SLX4Q8IY92 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SLX4Q8IY92 AL353803.4-201ENST00000565882 1934 ntBASIC26.86■■□□□ 1.89
SLX4Q8IY92 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.86■■□□□ 1.89
SLX4Q8IY92 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.86■■□□□ 1.89
SLX4Q8IY92 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.86■■□□□ 1.89
SLX4Q8IY92 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLX4Q8IY92 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLX4Q8IY92 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLX4Q8IY92 AC133552.2-202ENST00000575694 574 ntBASIC26.85■■□□□ 1.89
SLX4Q8IY92 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLX4Q8IY92 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SLX4Q8IY92 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.85■■□□□ 1.89
SLX4Q8IY92 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLX4Q8IY92 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLX4Q8IY92 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 FAM201B-201ENST00000458407 597 ntBASIC26.84■■□□□ 1.89
SLX4Q8IY92 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLX4Q8IY92 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.84■■□□□ 1.89
SLX4Q8IY92 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.83■■□□□ 1.89
SLX4Q8IY92 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.83■■□□□ 1.89
SLX4Q8IY92 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SLX4Q8IY92 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
SLX4Q8IY92 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLX4Q8IY92 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.82■■□□□ 1.88
SLX4Q8IY92 AC142381.3-201ENST00000568208 1670 ntBASIC26.82■■□□□ 1.88
SLX4Q8IY92 POU5F1P3-201ENST00000428824 1078 ntBASIC26.82■■□□□ 1.88
SLX4Q8IY92 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.82■■□□□ 1.88
SLX4Q8IY92 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.82■■□□□ 1.88
SLX4Q8IY92 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.82■■□□□ 1.88
SLX4Q8IY92 ITM2C-210ENST00000620962 501 ntBASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms