Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS2Q86VP3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS2Q86VP3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS2Q86VP3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PACS2Q86VP3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS2Q86VP3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.78■■□□□ 1.08
PACS2Q86VP3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PACS2Q86VP3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.78■■□□□ 1.08
PACS2Q86VP3 RARRES2P1-201ENST00000474487 481 ntBASIC21.78■■□□□ 1.08
PACS2Q86VP3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.78■■□□□ 1.08
PACS2Q86VP3 KRT8P33-201ENST00000508125 1423 ntBASIC21.78■■□□□ 1.08
PACS2Q86VP3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS2Q86VP3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS2Q86VP3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS2Q86VP3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.77■■□□□ 1.08
PACS2Q86VP3 AC079630.1-202ENST00000618127 1840 ntBASIC21.77■■□□□ 1.08
PACS2Q86VP3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS2Q86VP3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
PACS2Q86VP3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PACS2Q86VP3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.77■■□□□ 1.07
PACS2Q86VP3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PACS2Q86VP3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PACS2Q86VP3 AC010542.4-201ENST00000563151 1910 ntBASIC21.76■■□□□ 1.07
PACS2Q86VP3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS2Q86VP3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PACS2Q86VP3 LINC01006-201ENST00000333319 2292 ntBASIC21.76■■□□□ 1.07
PACS2Q86VP3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS2Q86VP3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.75■■□□□ 1.07
PACS2Q86VP3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 AC026471.1-201ENST00000564629 3026 ntBASIC21.74■■□□□ 1.07
PACS2Q86VP3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.74■■□□□ 1.07
PACS2Q86VP3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.74■■□□□ 1.07
PACS2Q86VP3 MIR4508-201ENST00000584178 70 ntBASIC21.74■■□□□ 1.07
PACS2Q86VP3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.74■■□□□ 1.07
PACS2Q86VP3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
PACS2Q86VP3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PACS2Q86VP3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS2Q86VP3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.73■■□□□ 1.07
PACS2Q86VP3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS2Q86VP3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.73■■□□□ 1.07
PACS2Q86VP3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PACS2Q86VP3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.72■■□□□ 1.07
PACS2Q86VP3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PACS2Q86VP3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS2Q86VP3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms