Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 MIR6722-201ENST00000617286 78 ntBASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 BX664725.1-201ENST00000438252 379 ntBASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCHD4Q6ZW05 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 AC005703.6-201ENST00000623265 1329 ntBASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PTCHD4Q6ZW05 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 SLC25A24-204ENST00000569674 2357 ntBASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PTCHD4Q6ZW05 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCHD4Q6ZW05 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCHD4Q6ZW05 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
PTCHD4Q6ZW05 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCHD4Q6ZW05 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 LINC01960-201ENST00000563759 1884 ntBASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 RARRES2P1-201ENST00000474487 481 ntBASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 AC092028.1-203ENST00000608262 953 ntBASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 AC005229.4-201ENST00000610085 2198 ntBASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 LINC01529-204ENST00000636474 1715 ntBASIC19.88■□□□□ 0.77
PTCHD4Q6ZW05 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms