Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL4Q6ZR62 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL4Q6ZR62 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL4Q6ZR62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 AC010525.1-201ENST00000585559 441 ntBASIC20.29■□□□□ 0.84
RTL4Q6ZR62 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTL4Q6ZR62 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL4Q6ZR62 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 IRS3P-201ENST00000223076 1006 ntBASIC20.27■□□□□ 0.84
RTL4Q6ZR62 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL4Q6ZR62 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RTL4Q6ZR62 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTL4Q6ZR62 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 IGHV3-19-201ENST00000521488 291 ntBASIC20.26■□□□□ 0.83
RTL4Q6ZR62 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 AC004687.1-201ENST00000579003 1625 ntBASIC20.26■□□□□ 0.83
RTL4Q6ZR62 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 TSPY26P-201ENST00000476365 1326 ntBASIC20.26■□□□□ 0.83
RTL4Q6ZR62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTL4Q6ZR62 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms