Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.63■■□□□ 1.53
SHC4Q6S5L8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SHC4Q6S5L8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.63■■□□□ 1.53
SHC4Q6S5L8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SHC4Q6S5L8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHC4Q6S5L8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.62■■□□□ 1.53
SHC4Q6S5L8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.61■■□□□ 1.53
SHC4Q6S5L8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHC4Q6S5L8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 SRD5A1P1-201ENST00000442297 786 ntBASIC24.6■■□□□ 1.53
SHC4Q6S5L8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 MIR4466-201ENST00000606121 54 ntBASIC24.6■■□□□ 1.53
SHC4Q6S5L8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SHC4Q6S5L8 FAM99A-202ENST00000538190 1989 ntBASIC24.6■■□□□ 1.53
SHC4Q6S5L8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.59■■□□□ 1.53
SHC4Q6S5L8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SHC4Q6S5L8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.58■■□□□ 1.52
SHC4Q6S5L8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
SHC4Q6S5L8 AL137060.1-201ENST00000618151 2648 ntBASIC24.58■■□□□ 1.52
SHC4Q6S5L8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SHC4Q6S5L8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.57■■□□□ 1.52
SHC4Q6S5L8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SHC4Q6S5L8 OR2I1P-207ENST00000453522 948 ntBASIC24.55■■□□□ 1.52
SHC4Q6S5L8 AC079089.2-201ENST00000531211 1277 ntBASIC24.55■■□□□ 1.52
SHC4Q6S5L8 AC010525.1-201ENST00000585559 441 ntBASIC24.55■■□□□ 1.52
SHC4Q6S5L8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SHC4Q6S5L8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms